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Information

Name: Hyperthermophilic archaeal viruses
Life Domain: archaea
Description: The data is taken from several publications, including PMID: 22936928, 26884161, 10430569, 24433295, 22834906, 14592760.
Visibility: Public
Owner: Mart Krupovic Contact owner
Creation Date: April 18, 2020, 4:32 p.m.
Last Edition Date: April 20, 2020, 11:33 a.m.

Content

Viruses	13
Hosts	12
Responses	155

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The file to fill is a double-entry table (see example on the right) where rows are viruses and columns are hosts, and for which the infection status is entered as a number. The recommended values to use are: 0 ( No infection), 1 ( Intermediate) and 2 ( Infection), but you will later be able to map any value used to this global scheme.

More information can be found in the documentation.

	E. coli MG1655 (NC_000913.3)	E. coli O157:H7 (AE005174.2)
T4 (NC_000866.4; HER:27)	2	0
T7 (NC_001604.1)	1	2
MyVirus	2	1

download example file

Response scheme used

Original response	Response mapped
0.0	No infection
1.0	Intermediate
2.0	Infection

Viruses

Acidianus filamentus virus 1(NC_005830; TAX:235266), Acidianus rod-shaped virus 3(MN876842; TAX:2730617), Pyrobaculum filamentous virus 1(NC_029548; TAX:1805492), Pyrobaculum filamentous virus 2(MN876844; TAX:2730621), Pyrobaculum spherical virus 2(MN876845; TAX:2730632), Sulfolobus islandicus filamentous virus(NC_003214; TAX:176106), Sulfolobus islandicus rod-shaped virus 2(NC_004086; TAX:157899), Sulfolobus islandicus rod-shaped virus 3(NC_030884; TAX:1895333), Sulfolobus monocaudavirus 1(NC_023585; TAX:1351702), Sulfolobus polyhedral virus 1(NC_038017; TAX:1982658), Sulfolobus spindle-shaped virus 1(NC_001338; TAX:244589), Sulfolobus spindle-shaped virus 2(NC_005265; TAX:244590), Sulfolobus spindle-shaped virus 3(KY579375; TAX:1959009)

Hosts

Acidianus brierleyi POZ9, Acidianus hospitalis W1(NC_015518; TAX:933801), Pyrobaculum arsenaticum 2GA, Pyrobaculum arsenaticum PZ6, Pyrobaculum oguniense TE7(CP003316; TAX:698757), Saccharolobus shibatae S38A, Sulfolobus islandicus HVE10/4(NC_017275; TAX:930943), Sulfolobus islandicus LAL14/1(NC_021058; TAX:1241935), Sulfolobus islandicus REY15A(NC_017276; TAX:930945), Sulfolobus solfataricus P1(NZ_LT549890; TAX:2287), Sulfolobus solfataricus P2(NC_002754; TAX:273057), Sulfurisphaera ohwakuensis