Data Source Explore it

Information

Name: Host range of phages isolated from a smear-ripened cheese
Life Domain: bacteria
Publication: Open it
Description: The spot assay experiment was realised by T. Paillet in the SayFood lab. 5μL of a phage solution were spotted on a lawn of bacteria. The results were assessed visually by the presence of plaques. The phages and hosts tested were isolated by T. Paillet from a smear-ripened cheese. Those results were published in Viruses, 2022.
Visibility: Public
Owner: Thomas Paillet Contact owner
Creation Date: March 29, 2023, 3:47 a.m.
Last Edition Date: March 29, 2023, 3:48 a.m.

Content

Viruses	5
Hosts	86
Responses	103

Download it

The file to fill is a double-entry table (see example on the right) where rows are viruses and columns are hosts, and for which the infection status is entered as a number. The recommended values to use are: 0 ( No infection), 1 ( Intermediate) and 2 ( Infection), but you will later be able to map any value used to this global scheme.

More information can be found in the documentation.

	E. coli MG1655 (NC_000913.3)	E. coli O157:H7 (AE005174.2)
T4 (NC_000866.4; HER:27)	2	0
T7 (NC_001604.1)	1	2
MyVirus	2	1

download example file

Response scheme used

Original response	Response mapped
0.0	No infection
2.0	Infection

Viruses

Brevibacterium phage Rousseau(OV696622; TAX:2891957), Glutamicibacter phage Montesquieu(OV696619; TAX:2891956), Glutamicibacter phage Voltaire(OV696617; TAX:2891955), Leuconostoc phage Diderot(OV696621; TAX:2891958), Psychrobacter phage D'Alembert(OV696620; TAX:2891959)

Hosts

Brevibacterium aurantiacum 25, Brevibacterium aurantiacum 299, Brevibacterium aurantiacum 2M23, Brevibacterium aurantiacum ATCC 9174, Brevibacterium aurantiacum ATCC 9175(DSM 20426), Brevibacterium aurantiacum B20, Brevibacterium aurantiacum B3, Brevibacterium aurantiacum B67, Brevibacterium aurantiacum CAM 12C, Brevibacterium aurantiacum CAM-4, Brevibacterium aurantiacum FME34, Brevibacterium aurantiacum FME43, Brevibacterium aurantiacum FME45, Brevibacterium aurantiacum FME48, Brevibacterium aurantiacum FME49, Brevibacterium aurantiacum FME9, Brevibacterium casei CIP 102111(DSM 20657), Brevibacterium epidermidis NCDO 2286T(DSM 20660), Brevibacterium iodinum ATCC 49514T(DSM 20626), Brevibacterium linens ATCC 9172(DSM 20425), Brevibacterium sandarakinum DSM 22082, Glutamicibacter arilaitensis DSM 16368, Glutamicibacter arilaitensis G119, Glutamicibacter arilaitensis G135, Glutamicibacter arilaitensis G16, Glutamicibacter arilaitensis G183, Glutamicibacter arilaitensis G186, Glutamicibacter arilaitensis G201, Glutamicibacter arilaitensis G26, Glutamicibacter arilaitensis G33, Glutamicibacter arilaitensis G43, Glutamicibacter arilaitensis G51, Glutamicibacter arilaitensis G52, Glutamicibacter arilaitensis G53, Glutamicibacter arilaitensis G65, Glutamicibacter bergerei DSM 16367, Glutamicibacter nicotianae DSM 20123, Glutamicibacter uratoxydans DSM 20647, Leuconostoc citreum MSE2, Leuconostoc falkenbergense 114, Leuconostoc falkenbergense 116, Leuconostoc falkenbergense 90, Leuconostoc falkenbergense 91, Leuconostoc falkenbergense 92, Leuconostoc falkenbergense 93, Leuconostoc falkenbergense 96, Leuconostoc falkenbergense 98, Leuconostoc falkenbergense 99, Leuconostoc lactis NCW1, Leuconostoc mesenteroides 101, Leuconostoc mesenteroides 102, Leuconostoc mesenteroides 107, Leuconostoc mesenteroides 108, Leuconostoc mesenteroides 113, Leuconostoc mesenteroides 115, Leuconostoc mesenteroides 88, Leuconostoc mesenteroides 89, Leuconostoc mesenteroides 95, Leuconostoc mesenteroides 97, Leuconostoc mesenteroides ssp. cremoris DSM 20346, Leuconostoc pseudomesenteroides MSE7, Psychrobacter aquimari ER15 174 BHI7, Psychrobacter aquimaris 124, Psychrobacter aquimaris 129, Psychrobacter aquimaris 15, Psychrobacter aquimaris 184, Psychrobacter aquimaris 200, Psychrobacter aquimaris 54, Psychrobacter aquimaris 59, Psychrobacter aquimaris 60, Psychrobacter aquimaris 69, Psychrobacter aquimaris 87, Psychrobacter celer DSM 23510, Psychrobacter cibarius 132, Psychrobacter cibarius 139, Psychrobacter cibarius140, Psychrobacter cibarius 157, Psychrobacter cibarius 158, Psychrobacter cibarius 160, Psychrobacter cibarius 165, Psychrobacter cibarius 171, Psychrobacter cibarius 181, Psychrobacter cibarius 198, Psychrobacter cibarius DSM 16327, Psychrobacter faecalis, Psychrobacter namhaensis 1439