Data Source Explore it

Information

Name: Félix D'Hérelle collection of bacterial viruses
Life Domain: bacteria
Description: This data corresponds to the entire Félix d'Hérelle Reference Center for bacterial viruses of the Université Laval (https://www.phage.ulaval.ca/en/home/).
Each virus/host pair of the collection has been entered in this data source with a "Infection" response. For viruses, their "HER" identifier is added and a direct link to the corresponding page on the d'Hérelle collection website is available by clicking on this identifier.
Visibility: Public
Owner: Quentin Lamy-Besnier Contact owner
Creation Date: April 15, 2020, 4:48 p.m.
Last Edition Date: Sept. 15, 2020, 12:35 p.m.

Content

Viruses	536
Hosts	368
Responses	537

Download it

The file to fill is a double-entry table (see example on the right) where rows are viruses and columns are hosts, and for which the infection status is entered as a number. The recommended values to use are: 0 ( No infection), 1 ( Intermediate) and 2 ( Infection), but you will later be able to map any value used to this global scheme.

More information can be found in the documentation.

	E. coli MG1655 (NC_000913.3)	E. coli O157:H7 (AE005174.2)
T4 (NC_000866.4; HER:27)	2	0
T7 (NC_001604.1)	1	2
MyVirus	2	1

download example file

Response scheme used

Original response	Response mapped
2.0	Infection

Viruses

1(HER:67), 1(KP869100; TAX:1508671; HER:255), 10(KP869108; TAX:1508672; HER:264), 109 Lindberg(HER:12), 10 heidelberg(HER:437), 11(KP869109; TAX:1508673; HER:265), 1139(HER:293), 1154A(HER:294), 11-68c(HER:327), 119x Lindberg(DQ163914; TAX:347326; HER:13), 11 heidelberg(HER:438), 12(KP869110; TAX:1508674; HER:266), 121(HER:370), 1214 Lindberg(HER:15), 121Q(NC_025447; TAX:1555202; HER:128), 13(HER:61), 13(KP869111; TAX:1508675; HER:267), 133(NC_015250; TAX:279006; HER:423), 13/3a(HER:94), 1358(NC_027120; TAX:741942; HER:205), 14(HER:62), 14(KP869112; TAX:1508676; HER:268), 1483(HER:344), 15(KP869113; TAX:1508677; HER:269), 16(HER:270), 16-19(HER:20), 1672(HER:272), 16 Lindberg(DQ163919; HER:2), 1706(NC_010576; TAX:475178; HER:455), 182(HER:80), 187(NC_007047; TAX:55511; HER:239), 1A(HER:86), 1 heidelberg(HER:428), 1 Lesley(HER:112), 1/V12(HER:339), 2(HER:256), 205(NC_002700; TAX:154784; HER:424), 21 Lindberg(HER:3), 2213/73(HER:425), 2389(HER:83), 24(KJ572844.2; TAX:1500712; HER:64), 24 Lindberg(HER:4), 2.5A(HER:185), 25 Popoff(DQ529280; TAX:233894; HER:85), 2638A(NC_007051; TAX:320836; HER:283), 2671(HER:82), 2685(HER:34), 27 Lesley(HER:115), 290F(HER:170), 2972(NC_007019; TAX:306323; HER:458), 29 Popoff(HER:104), 2/F2852-76(HER:69), 2 heidelberg(HER:429), 2 Lindberg(HER:271), 2P1(LN907801; TAX:38018; HER:578), 3(KP869101; TAX:1508678; HER:257), 31 Lindberg(HER:5), 31 Popoff(KY290951; TAX:1932898; HER:105), 32(HER:136), 32(HER:58), 32 Popoff(KY290952; TAX:1932899; HER:106), 33D(Warsaw), 352 Lindberg(HER:14), 392(HER:292), 3A(NC_007053; TAX:215167; HER:225), 3 heidelberg(HER:430), 3/K26(HER:159), 3M(HER:421), 3/M64-76(HER:70), 3 Popoff(KY290947; TAX:1932897; HER:84), 4(KP869102; TAX:1508679; HER:258), 40RR2.8t(KY290948; TAX:1932900; HER:98), 42(NC_014660; TAX:762660; HER:422), 4211(HER:35), 43 Lesley(HER:116), 43 Popoff(HER:107), 44AHJD(NC_004678; TAX:204086; HER:101), 44 Lindberg(HER:6), 493(HER:354), 4996(HER:60), 4/C1334-7(HER:71), 4 heidelberg(HER:431), 5(KP869103; TAX:1508680; HER:259), 51 Popoff(KY290953; TAX:1932901; HER:108), 531(HER:32), 56 Popoff(KY290954; TAX:1932902; HER:109), 57(HER:59), 59.1(KY290950; TAX:1932903; HER:100), 5/C394-76(HER:72), 5 heidelberg(HER:432), 6(KP869104; TAX:1508681; HER:260), 65 Popoff(KY290955; TAX:1932896; HER:110), 68 Lindberg(HER:7), 6/C753-75(HER:73), 6ec(HER:555), 6 heidelberg(HER:433), 6/K27(HER:160), 7(KP869105; TAX:1508682; HER:261), 70 Lesley(HER:126), 71(NC_007059; TAX:320844; HER:238), 7-11(345461107; HER:19), 71A-6(HER:289), 73 Lindberg(DQ163913; TAX:347325; HER:8), 77(NC_005356; TAX:259901; HER:226), 7a Lesley(HER:114), 7/F783-76(HER:74), 7 heidelberg(HER:434), 7 Lindberg(DQ163918; HER:1), 8(KP869106; TAX:1508683; HER:262), 8101(HER:296), 812(NC_029080; TAX:307898; HER:475), 83-24(NC_028834; TAX:1589747; HER:227), 858(NC_010353; TAX:459845; HER:459), 8/C239-76(HER:75), 8 heidelberg(HER:435), 9(KP869107; TAX:1508684; HER:263), 9266Q(HER:21), 936(KC182544; TAX:39838; HER:203), 949(NC_015263; TAX:881953; HER:204), 9 heidelberg(HER:436), A10/A45(HER:50), A-1-L(HER:279), A2(NC_004112; TAX:51369; HER:482), A3/2(HER:33), A36(HER:127), A3 Lesley(HER:121), A41(HER:300), A511(NC_009811; TAX:40523; HER:394), A8 Lesley(HER:122), A9(NC_015253; TAX:857312; HER:208), Ab03(NC_026587; TAX:1548901; HER:556), Ab04(LN610581; TAX:1548909; HER:557), Ab05(NC_026602; TAX:1548902; HER:558), Ab06(LN610582; TAX:1548910; HER:559), Ab08(LN610575; TAX:1548903; HER:572), Ab09(NC_024140; TAX:1476391; HER:560), Ab1(NC_019918; TAX:1231048; HER:571), Ab10(LN610586; TAX:1548914; HER:573), Ab11(LN610583; TAX:1548911; HER:561), Ab17(LN610576; TAX:1548904; HER:562), Ab18(NC_026594; TAX:1548905; HER:563), Ab19(NC_042115; TAX:1548912; HER:564), Ab20(LN610585; TAX:1548913; HER:565), Ab22(LN610578; TAX:1548906; HER:575), Ab26(HG962376; TAX:1476390; HER:581), Ab27(NC_026586; TAX:1548907; HER:566), Ab28(NC_026600; TAX:1548917; HER:568), Ab29(LN610588; TAX:1548916; HER:569), Ab30(NC_026601; TAX:1548918; HER:570), a/C7(HER:244), Aeh1(NC_005260; TAX:227470; HER:209), Aeh2(HER:210), AGL4(HER:365), alpha3(NC_001330; TAX:10849; HER:536), ALQ13.2(NC_013598; TAX:682370; HER:478), AP50(NC_011523; TAX:513550; HER:140), Asp37(KY290949; TAX:1932904; HER:99), Attis(KU963247; TAX:1821548; HER:594), Av-1(NC_009643; TAX:338473; HER:242), B.1715V1(HER:358), B277(HER:295), B9GP(HER:162), B9PP(HER:96), Ba2(HER:345), Ba24(HER:81), Bace-11(HER:414), Baits(HER:329), Bam35(NC_005258; TAX:236750; HER:410), BaSTC2(HER:381), Bastille(NC_018856; TAX:57477; HER:211), Bat1(HER:231), Bat10(HER:234), Bat11(HER:235), Bat18(HER:236), Bat5(HER:232), Bat7(HER:233), Baxterfox(KU963263; TAX:1821549; HER:595), BCJA1c(NC_006557; TAX:294382; HER:406), Beccles(HER:220), Bf1(HER:310), Bignuz(HER:538), bIL170(NC_001909; TAX:63118; HER:450), bIL67(NC_001629; TAX:36343; HER:449), Bk(KC556893; TAX:1308869; HER:134), BK1(HER:330), BK5-T(NC_002796; TAX:31754; HER:378), BL3(NC_015254; TAX:764562; HER:187), bla(HER:403), Bo4(KC787107; TAX:1327949; HER:384), BRET(MK165087; TAX:2488948; HER:586), Bron(HER:539), BS46(HER:401), BS5(HER:395), BW-1(HER:155), C-1(HER:222), C16(HER:43), c2(NC_001706; TAX:31537; HER:440), c6A(HER:338), Cba181(NC_021790; TAX:1327982; HER:531), Cba41(NC_021788; TAX:1328029; HER:530), cd1(HER:477), Charlie(HER:540), Che8(HER:541), Che9(HER:542), CJW 1(HER:543), CL1(NC_028888; TAX:1739607; HER:510), CL2(NC_028835; TAX:1739608; HER:511), CL31(HER:360), Clark(HER:333), CM1(HER:250), Cog(HER:229), CON11(HER:89), CON77(HER:90), CON8(HER:88), CONRH(HER:91), CONXC(HER:92), Corndog(HER:544), Cp-1(KJ617393; TAX:1498213; HER:223), CP51(HER:550), CP54(HER:551), CP-54Ber(HER:357), CPC(HER:324), CP-T1(NC_019457; TAX:10689; HER:373), CS1(HER:417), CS1(HER:466), D108(HER:252), D29(NC_001900; TAX:28369; HER:383), D3(NC_002484; TAX:31535; HER:245), D3112(NC_005178; TAX:10708; HER:288), Demosthenes(KU998242; TAX:1838067; HER:587), DNAIII(KC787108; TAX:1327950; HER:335), Dp-1(NC_015274; TAX:59241; HER:509), DP7(HER:404), DT1(NC_002072; TAX:90410; HER:368), DW2(NC_024391; TAX:1464127; HER:467), E13(HER:151), E14(HER:156), e15(30387379; HER:68), e4(HER:55), e5(HER:56), E79(HER:359), E920g(HER:41), Ebrios(HER:552), Erh1(HER:172), Esc-7-11(HER:22), F(HER:346), F10 Lindberg(DQ163912; TAX:347324; HER:11), F116L(56692908; HER:18), F7 Lindberg(HER:9), F8 Lindberg(DQ163917; TAX:347329; HER:10), FC3-9(HER:111), fri(HER:325), Fz(KC556894; TAX:1308870; HER:171), G(NC_023719; TAX:1084719; HER:276), G3(HER:407), GA-1(NC_002649; TAX:12345; HER:182), gh-1(NC_004665; TAX:197783; HER:353), GIL01(HER:460), GIL16(NC_006945; TAX:307240; HER:461), GP-10 = Liu 4(HER:418), H1(HER:183), H100/1(HER:321), H105/1(HER:328), H106/1(HER:322), H-19J(HER:275), H2(HER:347), H387(HER:184), H7/2(HER:320), Haiti(HER:176), Halo(HER:545), HK243(HER:139), HK97(NC_002167; TAX:37554; HER:382), HM2(HER:179), HM3(HER:180), HM7(HER:181), HP1(NC_001697; TAX:10690; HER:396), HXX(HER:103), I(HER:51), I2-2(NC_001332; TAX:10869; HER:213), I3(HER:202), II(HER:52), III(HER:53), IPy-1(HER:246), IV(HER:54), J(HER:219), Ja.1(HER:343), Jersey(525972166; HER:45), JX1(HER:215), K(NC_005880; TAX:221915; HER:474), K20(HER:366), K30(NC_015719; TAX:1041524; HER:374), Kappa(NC_010275.2; TAX:493906; HER:65), KF1(HER:224), Kl3(HER:173), Kl9Q(HER:426), KSY1(NC_009817; TAX:388452; HER:248), Kvp1(NC_011534; TAX:47049; HER:400), KVP20(HER:299), KVP40(NC_005083; TAX:75320; HER:193), L-1(HER:336), L5(NC_001335; TAX:31757; HER:386), Lco22(HER:274), Legendre(HER:334), Leo(NC_021556; TAX:1327952; HER:331), LeviOr01(LT821717; TAX:1927956; HER:580), LIT1(NC_013692; TAX:655098; HER:526), LP52(HER:192), LU11(NC_017972; TAX:1161927; HER:443), LUZ24(NC_010325; TAX:484895; HER:527), M(NC_019707; TAX:1235640; HER:218), M102(NC_012884; TAX:372457; HER:456), M102AD(NC_028984; TAX:1587907; HER:503), M3 Lesley(HER:123), M4 Lesley(HER:124), M4 Lindberg(HER:16), M5 Lesley(HER:125), M6 Lindberg(DQ163916; TAX:347328; HER:17), MB4(HER:446), MED1(KJ997912; TAX:1508658; HER:504), MJ-1(HER:163), MJ-4(HER:164), MM1H(HER:291), mor1(HER:78), MP13(HER:141), MP15(HER:143), MS1(KY629621; TAX:1962672; HER:532), MS2(NC_001417; TAX:12022; HER:462), MSP2(HER:195), MT(HER:207), Mu(NC_000929; TAX:2681603; HER:253), N1(HER:194), N2(HER:342), N2 Lesley(HER:117), N3 Lesley(971758890; HER:118), N4(119952179; HER:77), N4 Lesley(HER:119), N5(HER:157), N9 Lesley(HER:120), NF5(NC_015252; TAX:764561; HER:188), NJL(HER:298), NM1(HER:79), nt-1(NC_021529; TAX:115992; HER:150), nt-6(HER:138), Nymphadora(KU963255; TAX:1821558; HER:593), O1(38707640; HER:40), O103(HER:337), O2(HER:476), O9-1(HER:375), Omega(HER:546), Or1(NC_019813; TAX:1234701; HER:576), P001(HER:142), P008(NC_008363; TAX:83129; HER:228), P087(NC_012663; TAX:641487; HER:361), P10(HER:444), P107(HER:362), P1D(HER:393), P1kc(HER:93), p2(GQ979703; TAX:254252; HER:457), P2(NC_001895; TAX:10679; HER:31), P22(NC_002371; TAX:10754; HER:161), P270(HER:302), P335(DQ838728; TAX:201846; HER:463), P369(HER:303), P3P1(LT594787; TAX:287; HER:577), P400(HER:230), P68(HER:49), P70(NC_018831; TAX:1225800; HER:537), PA5oct(HER:483), PAU(NC_019521; TAX:1150991; HER:398), PB-1(NC_011810; TAX:538398; HER:146), PBLO.5c(HER:341), PBP1(HER:314), PBS1(HER:97), PEa 31-2(HER:448), Pf1(NC_001331; TAX:2011081; HER:391), Pg1(HER:547), phiC725A(HER:567), PII10A(LT594786; TAX:287; HER:579), pilHa(HER:240), PK1(HER:405), PL-1(NC_022757; TAX:39103; HER:319), PM2(NC_000867; TAX:10661; HER:254), PM4(HER:214), PM6(HER:216), PP7(NC_001628; TAX:12023; HER:369), PR64FS(HER:217), PR772(AY441783; TAX:261665; HER:221), PRD1(159192286; HER:23), Pro2(HER:273), PS17(HER:352), pt1(HER:42), Q1(HER:442), Q54(NC_008364; TAX:382685; HER:454), R17(EF108465; TAX:12022; HER:290), r1t(NC_004302; TAX:43685; HER:465), RB69(NC_004928; TAX:12353; HER:158), R/C(KC556895; TAX:1277895; HER:135), RcCronus(KR935217; TAX:1662333; HER:553), RcTitan(KR935213; TAX:1662330; HER:554), Remus(NC_031031; TAX:1887652; HER:528), Roy(HER:316), RS1(HER:277), S16(NC_020416; TAX:1087482; HER:535), S45(HER:237), S708(KC556896; TAX:1308871; HER:132), S-a(HER:416), Sab2(HER:340), SasL4(HER:397), SasL6(HER:415), SD1-M(HER:413), Sedge(HER:332), sk1(NC_001835; TAX:31532; HER:439), SLE111(HER:284), Smoothie(KU998244; TAX:1838078; HER:588), SN45(HER:392), Soups(KU998249; TAX:1838079; HER:592), SP-10(NC_019487; TAX:941058; HER:148), SP-15(NC_031245; TAX:1792032; HER:130), SP16(HER:348), SP50(HER:174), SP8(HER:147), SPO1(NC_011421; TAX:10685; HER:447), SPP1(NC_004166; TAX:10724; HER:149), SPy-2(HER:206), SPy-3(HER:379), SPβ(HER:175), SS4(HER:364), ß4Q(HER:129), SST(P2), ST(HER:529), T1(NC_005833.1; TAX:1921008; HER:24), T1 Lesley(HER:113), T1UV(HER:468), T2(HER:25), T3(NC_003298.1; TAX:10759; HER:26), T4(NC_000866.4; TAX:10665; HER:27), T5(NC_005859.1; TAX:10726; HER:28), T6(HER:29), T7(NC_001604.1; TAX:10760; HER:30), T7-Ah(HER:212), Tb(NC_019446; TAX:1133292; HER:131), Tb10(HER:380), TC4(HER:445), Tg4(HER:387), TM4(HER:548), Tohama(HER:278), TP-15(HER:399), TP21-L(EU887664; TAX:565140; HER:533), Tuc2009(NC_002703; TAX:35241; HER:464), Twort(29565743; HER:48), ul36(NC_004066; TAX:114416; HER:441), UTAK(HER:412), VD13(643319045; HER:44), VD1884(HER:323), Vendetta(KU998237; TAX:1838082; HER:590), Vf33(NC_005948; TAX:127509; HER:280), Vi I(326804500; HER:38), Vi II(HER:39), VP1(HER:165), VP11(HER:167), VP12(HER:168), VP5(NC_005891; TAX:260827; HER:169), VP6(HER:166), Wb(KC556898; TAX:1277893; HER:133), Werquin(HER:201), Wiseman(HER:385), Wizard(KU998234; TAX:1838083; HER:589), Woes(KU998240; TAX:1838084; HER:591), W.Ph(NC_016563; TAX:764595; HER:534), X29(697424991; HER:66), XMM1(HER:76), XP-12(HER:154), Y(HER:304), α3A(HER:137), αc3(66391255; HER:47), β(HER:356), β(HER:57), γ(NC_007458; TAX:347962; HER:388), η(NC_021563; TAX:1282995; HER:313), θ1(HER:190), θc(HER:191), κ(HER:306), λ(NC_001416; TAX:10710; HER:144), λvir(NC_001416; TAX:10710; HER:37), π(HER:311), σ(HER:312), Φ10(HER:178), Φ105(22854993; HER:46), Φ13(HER:420), Φ15(HER:355), Φ16(HER:307), Φ17(HER:287), Φ2037(HER:152), Φ29(NC_011048; TAX:10756; HER:243), Φ3626(NC_003524; TAX:190478; HER:390), Φ3T(HER:349), Φ4(HER:177), Φ400(HER:286), Φ6(GCF_000852125.1; HER:102), Φ8(HER:419), Φ92(NC_023693; TAX:948870; HER:241), ΦAa17(HER:363), ΦAbc2(NC_013645; TAX:633135; HER:479), ΦAcS3(HER:408), ΦAcS4(HER:409), ΦBA-1(HER:251), ΦC31(NC_001978; TAX:10719; HER:285), ΦCbK(NC_019405; TAX:1204537; HER:377), ΦCj1(HER:389), ΦCj27(HER:372), ΦCj7(HER:371), ΦCjT23(HER:326), ΦCR30(NC_025422; TAX:1357714; HER:376), ΦEC(HER:186), ΦFR114(HER:301), Φgal-1/OW(HER:197), Φgal-1/R(HER:196), Φgal-3/OW(HER:199), Φgal-3/R(HER:198), ΦH(HER:282), ΦHAWI-5(HER:308), ΦKZ(NC_004629; TAX:169683; HER:153), ΦLMUP35(HER:247), ΦM11S(HER:318), ΦN(HER:367), ΦPEL8C-1(HER:309), ΦPLS27(HER:200), ΦRsG1(HER:297), ΦW-14(NC_013697; TAX:665032; HER:145), ΦX174(NC_001422; TAX:10847; HER:36), ΦYeO3-12(NC_001271; TAX:110457; HER:249), χ(712913869; HER:95), ψ(HER:305), ψYS40(NC_008584; TAX:407392; HER:473), ω(HER:189), Ω8(HER:315)

Hosts